Deep sequencing of the viral phoH gene reveals temporal variation, depth-specific composition, and persistent dominance of the same viral phoH genes in the Sargasso Sea

Goldsmith, D.B., Parsons, R.J., Beyene, D., Salamon, P. and Breitbrt, M. 2015 “Deep sequencing of the viral phoH gene reveals temporal variation, depth-specific composition, and persistent dominance of the same viral phoH genes in the Sargasso Sea.” PeerJ 3, e997. https://doi.org/10.7717/peerj.997

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Environmental genome shotgun sequencing of the Sargasso Sea

Venter, J.C., Remington, K., Heidelberg, J.F., Halpern, A.L., Rusch, D., Eisen, J.A., Wu, D., Paulsen, I., Nelson, K.E., Nelson, W., Fouts, D.E., Levy, S., Knap, A.H., Lomas, M.W., Nealson, K., White, O., Peterson, J., Hoffman, J., Parsons, R., Baden-Tillson, H., Pfannkoch, C., Rogers, Y., Smith, H.O. (2004). Environmental genome shotgun sequencing of the Sargasso Sea. Science 304: 66-74.

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Sea-ice melt CO2-carbonate chemistry in the western Arctic Ocean: meltwater contributions to air-sea CO2 gas exchange, mixed layer properties and rates of net community production under sea ice

Bates, N.R., Garley, R., Frey, K.E., Shake, K.L., and Mathis, J.T., 2014. Sea-ice melt CO2-carbonate chemistry in the western Arctic Ocean: meltwate contributions to air-sea CO2 gas exchange, mixed layer properties and rates of net community production under sea ice. Biogeosciences Discuss, 11, 1097-1145.

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A time-series view of changing surface ocean chemistry due to ocean uptake of anthropogenic CO2 and ocean acidification

Bates, N.R., Y.M. Astor, M.J. Church, K. Currie, J.E. Dore, M. González-Dávila, L. Lorenzoni, F. Muller-Karger, J. Olafsson, and J.M. Santana-Casiano. 2014. A time-series view of changing ocean chemistry due to ocean uptake of anthropogenic CO2 and ocean acidification. Oceanography 27(1):126–141, dx.doi.org/10.5670/oceanog.2014.16.

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Feedbacks and responses of coral calcification on the Bermuda reef system to seasonal changes in biological processes and ocean acidification

Bates, N.R., Amat, A., and Andersson, A.J., 2010. The interaction of carbonate chemistry and coral reef calcification: the carbonate chemistry coral reef ecosystem feedback (CREF) hypothesis. Biogeosciences, 7 (5), 2509-2530, doi:10.5194/bg-7-2509-2010. Corrigendum: Biogeosciences, 7 (10), 3005-3006, doi: 10.5194/bg-7-3005-2010.

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Genome- and transcriptome-assisted development of nuclear insertion/deletion markers for Calanus species (Copepoda: Calanoida) identification

Smolina, I., Kollias, S., Poortvliet, M., Nielsen, T.G., Lindeque, P., Castellani, C., Møller, E.F., Blanco-Bercial, L., Hoarau, G. 2014. Genome- and transcriptome-assisted development of nuclear insertion/deletion markers for Calanus species (Copepoda: Calanoida) identification. Mol. Ecol. Res. in press (doi:10.1111/1755-0998.12241)

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